Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH29725.1 | SDI01815.1 | SAMN04489796_102189 | SAMN04489796_106134 | Hypothetical protein. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.990 |
SDH29725.1 | SDI31302.1 | SAMN04489796_102189 | SAMN04489796_10997 | Hypothetical protein. | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | 0.515 |
SDH29725.1 | SDI31722.1 | SAMN04489796_102189 | SAMN04489796_109109 | Hypothetical protein. | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | 0.923 |
SDH29725.1 | clpB | SAMN04489796_102189 | SAMN04489796_1126 | Hypothetical protein. | ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.923 |
SDH29725.1 | grpE | SAMN04489796_102189 | SAMN04489796_10484 | Hypothetical protein. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.969 |
SDI01815.1 | SDH29725.1 | SAMN04489796_106134 | SAMN04489796_102189 | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | Hypothetical protein. | 0.990 |
SDI01815.1 | SDI31302.1 | SAMN04489796_106134 | SAMN04489796_10997 | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | 0.612 |
SDI01815.1 | SDI31722.1 | SAMN04489796_106134 | SAMN04489796_109109 | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | 0.753 |
SDI01815.1 | clpB | SAMN04489796_106134 | SAMN04489796_1126 | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.744 |
SDI01815.1 | dnaK | SAMN04489796_106134 | SAMN04489796_11146 | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.993 |
SDI01815.1 | grpE | SAMN04489796_106134 | SAMN04489796_10484 | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.762 |
SDI27490.1 | SDI31302.1 | SAMN04489796_1097 | SAMN04489796_10997 | Hypothetical protein. | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | 0.660 |
SDI30945.1 | SDI31302.1 | SAMN04489796_10990 | SAMN04489796_10997 | Predicted phosphoribosyltransferase. | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | 0.595 |
SDI31250.1 | SDI31302.1 | SAMN04489796_10996 | SAMN04489796_10997 | Ca2+-transporting ATPase. | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | 0.522 |
SDI31302.1 | SDH29725.1 | SAMN04489796_10997 | SAMN04489796_102189 | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | Hypothetical protein. | 0.515 |
SDI31302.1 | SDI01815.1 | SAMN04489796_10997 | SAMN04489796_106134 | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.612 |
SDI31302.1 | SDI27490.1 | SAMN04489796_10997 | SAMN04489796_1097 | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | Hypothetical protein. | 0.660 |
SDI31302.1 | SDI30945.1 | SAMN04489796_10997 | SAMN04489796_10990 | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | Predicted phosphoribosyltransferase. | 0.595 |
SDI31302.1 | SDI31250.1 | SAMN04489796_10997 | SAMN04489796_10996 | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | Ca2+-transporting ATPase. | 0.522 |
SDI31302.1 | SDI31722.1 | SAMN04489796_10997 | SAMN04489796_109109 | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | 0.768 |
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