STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI43941.1PAS domain S-box-containing protein. (2292 aa)    
Predicted Functional Partners:
SDH33372.1
Tetratricopeptide repeat-containing protein.
 
 0.999
SDH33423.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.999
SDI08772.1
7TM diverse intracellular signalling.
 
 0.999
SDI08820.1
Two component regulator propeller.
  
 0.999
SDI28989.1
PAS domain S-box-containing protein.
 
 0.997
SDI02343.1
Signal transduction histidine kinase.
 0.989
SDH07302.1
Hypothetical protein.
0.988
SDI43905.1
Response regulator receiver domain-containing protein.
 
 0.988
SDG94551.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
0.987
SDH30697.1
PAS domain S-box-containing protein.
 
0.987
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.