STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI51363.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
SDI51320.1
Hypothetical protein.
       0.822
SDG85808.1
Protein of unknown function.
  
     0.605
SDI51289.1
Phosphate starvation-inducible protein PhoH.
       0.605
SDI51501.1
Gliding-associated putative ABC transporter substrate-binding component GldG.
       0.574
SDI51403.1
Protein involved in gliding motility GldF.
       0.544
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
   
 
  0.531
SDG78379.1
Sugar (pentulose or hexulose) kinase.
  
 
 0.531
SDI08921.1
Glutamate dehydrogenase/leucine dehydrogenase.
  
     0.462
SDI51450.1
Hypothetical protein.
       0.459
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.