STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI52430.1GxxExxY protein. (128 aa)    
Predicted Functional Partners:
SDH27239.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.947
SDH27212.1
Iron complex transport system ATP-binding protein.
  
 0.942
SDI52471.1
ABC-2 type transport system ATP-binding protein.
       0.519
SDI52390.1
ABC-2 type transport system permease protein.
       0.474
hisI
phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.
   
   0.455
SDI52602.1
HlyD family secretion protein.
  
    0.445
SDI52510.1
ABC-type multidrug transport system, ATPase component.
       0.432
SDI52558.1
Peroxiredoxin, SACOL1771 subfamily.
       0.432
SDI52650.1
Outer membrane protein TolC.
       0.422
SDI52692.1
DNA-binding transcriptional regulator, AcrR family.
       0.422
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.