STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI57228.1Hypothetical protein. (1153 aa)    
Predicted Functional Partners:
SDI57189.1
Exo-beta-1,3-glucanase, GH17 family.
 
     0.947
SDI57147.1
Glycosyl hydrolases family 2, TIM barrel domain.
 
     0.923
SDI57077.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
 
     0.891
SDI57037.1
Exo-beta-1,3-glucanase, GH17 family.
 
     0.852
SDI57113.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
 
     0.833
SDI57262.1
Glycosyl hydrolases family 16.
 
  
  0.747
SDI49702.1
Por secretion system C-terminal sorting domain-containing protein.
 
  
  0.659
SDI57297.1
PKD domain-containing protein.
 
  
  0.619
SDI57394.1
Regulatory protein, luxR family.
 
     0.601
SDH76433.1
Y_Y_Y domain-containing protein.
  
     0.539
Your Current Organism:
Winogradskyella thalassocola
NCBI taxonomy Id: 262004
Other names: Bacteroidetes bacterium KMM 3907, DSM 15363, KCTC 12221, KMM 3907, LMG 22492, LMG:22492, W. thalassocola, Winogradskyella thalassocola Nedashkovskaya et al. 2005 emend. Nedashkovskaya et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.