Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
drrBDrrB. (246 aa)    
Predicted Functional Partners:
drrA
DrrA.
 
  
 0.998
drrC
DrrC.
 
0.991
MAP_3533c
Hypothetical protein.
 
  
 0.875
MAP_3532c
Hypothetical protein.
 
 
0.856
pks8
Pks8.
  
  
 0.753
MAP_2560
Hypothetical protein.
 
  
 0.700
MAP_1184c
Hypothetical protein.
 
  
 0.590
MAP_4320
Hypothetical protein.
     
 0.589
MAP_1736
Hypothetical protein.
 
     0.556
MAP_0351
Hypothetical protein.
 
     0.551
Your Current Organism:
Mycobacterium avium
NCBI taxonomy Id: 262316
Other names: M. avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K10, Mycobacterium avium subsp. paratuberculosis str. K-10, Mycobacterium avium subsp. paratuberculosis strain K-10
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