STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP_1462Hypothetical protein. (400 aa)    
Predicted Functional Partners:
fadB
FadB_1.
  
 0.933
fadB-2
FadB_2.
  
 0.933
MAP_2587
Hypothetical protein.
 
 
 0.907
MAP_4301c
Hypothetical protein.
 
 
 0.907
MAP_4296c
Hypothetical protein.
 
 
 0.905
MAP_1461
Hypothetical protein.
 
     0.842
MAP_1459
Hypothetical protein.
  
 
 0.837
MAP_1458
Hypothetical protein.
  
 
 0.810
MAP_3114
Hypothetical protein.
 
 
 0.805
echA4
EchA4.
 
 0.780
Your Current Organism:
Mycobacterium avium
NCBI taxonomy Id: 262316
Other names: M. avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K10, Mycobacterium avium subsp. paratuberculosis str. K-10, Mycobacterium avium subsp. paratuberculosis strain K-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.