STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP_3428cHypothetical protein. (235 aa)    
Predicted Functional Partners:
amiA
AmiA.
  
    0.802
amiB
AmiB; Belongs to the peptidase M20A family.
  
    0.802
deoD
DeoD; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.757
pmmB
PmmB.
     
 0.660
MAP_3466
Hypothetical protein.
  
 0.645
MAP_1331c
Hypothetical protein.
  
 0.644
MAP_1457
Hypothetical protein.
  
 0.644
MAP_2100
Hypothetical protein.
  
 0.644
MAP_3465
Hypothetical protein.
  
 0.644
MAP_3757c
Hypothetical protein; Belongs to the UPF0255 family.
 
     0.643
Your Current Organism:
Mycobacterium avium
NCBI taxonomy Id: 262316
Other names: M. avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K10, Mycobacterium avium subsp. paratuberculosis str. K-10, Mycobacterium avium subsp. paratuberculosis strain K-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.