STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP_4009Hypothetical protein. (245 aa)    
Predicted Functional Partners:
MAP_4008
Hypothetical protein.
 
   
 0.884
pirG
PirG.
  
   
 0.710
MAP_3718c
Hypothetical protein.
  
     0.705
MAP_0309c
Hypothetical protein.
  
     0.693
MAP_3801
Hypothetical protein.
 
   0.691
MAP_3824
Hypothetical protein.
 
   0.667
MAP_3786
Hypothetical protein.
  
     0.664
MAP_2236
Hypothetical protein.
  
     0.663
MAP_4331c
Hypothetical protein.
 
   0.654
MAP_4242
Hypothetical protein.
 
     0.643
Your Current Organism:
Mycobacterium avium
NCBI taxonomy Id: 262316
Other names: M. avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K10, Mycobacterium avium subsp. paratuberculosis str. K-10, Mycobacterium avium subsp. paratuberculosis strain K-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.