STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG76370.1Uncharacterized conserved protein YegL, contains vWA domain of TerY type. (350 aa)    
Predicted Functional Partners:
SHG76336.1
Serine/threonine protein phosphatase PrpC.
 
    0.964
SHG76298.1
Protein kinase domain-containing protein.
 
    0.953
SHG76486.1
Uncharacterized conserved protein YegL, contains vWA domain of TerY type.
 
    
0.828
SHG76600.1
Tellurium resistance protein TerZ.
 
     0.796
SHG76408.1
Hypothetical protein.
       0.776
SHG76447.1
Hypothetical protein.
       0.773
SHG76637.1
Tellurium resistance protein TerD.
 
     0.756
SHG76751.1
Tellurium resistance protein TerZ.
 
     0.753
SHG76793.1
Tellurium resistance protein TerD.
 
     0.750
SHG76908.1
Tellurium resistance protein TerD.
 
     0.744
Your Current Organism:
Flavobacterium frigidimaris
NCBI taxonomy Id: 262320
Other names: Cytophaga sp. KUC-1, DSM 15937, F. frigidimaris, Flavobacterium frigidimaris Nogi et al. 2005, JCM 12218, strain KUC-1
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