STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG91587.1Hypothetical protein. (303 aa)    
Predicted Functional Partners:
SHG91555.1
Hypothetical protein.
       0.773
SHG01130.1
General stress protein 26.
   
    0.664
SHG91631.1
Hypothetical protein.
       0.610
SHG91666.1
Hypothetical protein.
       0.566
SHG91704.1
Hypothetical protein.
       0.555
SHG24231.1
ZIP Zinc transporter.
  
    0.523
SHG65765.1
Hypothetical protein.
  
    0.518
SHH81212.1
Hypothetical protein.
  
    0.518
SHG67225.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
    0.516
SHG91738.1
DNA-binding transcriptional regulator GbsR, MarR family; Belongs to the GbsR family.
 
     0.516
Your Current Organism:
Flavobacterium frigidimaris
NCBI taxonomy Id: 262320
Other names: Cytophaga sp. KUC-1, DSM 15937, F. frigidimaris, Flavobacterium frigidimaris Nogi et al. 2005, JCM 12218, strain KUC-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.