Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG06434.1 | SHG45534.1 | SAMN05444481_1023 | SAMN05444481_104276 | Cytochrome P450. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.967 |
SHG06434.1 | SHH02467.1 | SAMN05444481_1023 | SAMN05444481_11096 | Cytochrome P450. | Protein of unknown function. | 0.446 |
SHG45534.1 | SHG06434.1 | SAMN05444481_104276 | SAMN05444481_1023 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Cytochrome P450. | 0.967 |
SHG45534.1 | SHH02467.1 | SAMN05444481_104276 | SAMN05444481_11096 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Protein of unknown function. | 0.618 |
SHG45534.1 | SHH02495.1 | SAMN05444481_104276 | SAMN05444481_11097 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.732 |
SHG45534.1 | SHH75498.1 | SAMN05444481_104276 | SAMN05444481_12648 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Cytochrome P450. | 0.974 |
SHH02383.1 | SHH02412.1 | SAMN05444481_11093 | SAMN05444481_11094 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHH02383.1 | SHH02441.1 | SAMN05444481_11093 | SAMN05444481_11095 | Hypothetical protein. | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.469 |
SHH02383.1 | SHH02467.1 | SAMN05444481_11093 | SAMN05444481_11096 | Hypothetical protein. | Protein of unknown function. | 0.450 |
SHH02383.1 | SHH02495.1 | SAMN05444481_11093 | SAMN05444481_11097 | Hypothetical protein. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.450 |
SHH02412.1 | SHH02383.1 | SAMN05444481_11094 | SAMN05444481_11093 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHH02412.1 | SHH02441.1 | SAMN05444481_11094 | SAMN05444481_11095 | Hypothetical protein. | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.469 |
SHH02412.1 | SHH02467.1 | SAMN05444481_11094 | SAMN05444481_11096 | Hypothetical protein. | Protein of unknown function. | 0.450 |
SHH02412.1 | SHH02495.1 | SAMN05444481_11094 | SAMN05444481_11097 | Hypothetical protein. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.450 |
SHH02441.1 | SHH02383.1 | SAMN05444481_11095 | SAMN05444481_11093 | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Hypothetical protein. | 0.469 |
SHH02441.1 | SHH02412.1 | SAMN05444481_11095 | SAMN05444481_11094 | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Hypothetical protein. | 0.469 |
SHH02441.1 | SHH02467.1 | SAMN05444481_11095 | SAMN05444481_11096 | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | Protein of unknown function. | 0.737 |
SHH02441.1 | SHH02495.1 | SAMN05444481_11095 | SAMN05444481_11097 | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.829 |
SHH02441.1 | SHH02524.1 | SAMN05444481_11095 | SAMN05444481_11098 | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.688 |
SHH02467.1 | SHG06434.1 | SAMN05444481_11096 | SAMN05444481_1023 | Protein of unknown function. | Cytochrome P450. | 0.446 |
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