Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG10417.1 | SHG32746.1 | SAMN05444481_102150 | SAMN05444481_103384 | Thioredoxin reductase (NADPH). | Glutamate synthase (NADH) large subunit. | 0.835 |
SHG10417.1 | SHG62372.1 | SAMN05444481_102150 | SAMN05444481_1062 | Thioredoxin reductase (NADPH). | Thioredoxin reductase (NADPH). | 0.912 |
SHG10417.1 | SHH44687.1 | SAMN05444481_102150 | SAMN05444481_11760 | Thioredoxin reductase (NADPH). | Bacillithiol system protein YtxJ. | 0.766 |
SHG10417.1 | SHH58236.1 | SAMN05444481_102150 | SAMN05444481_12028 | Thioredoxin reductase (NADPH). | Thioredoxin reductase (NADPH). | 0.815 |
SHG32746.1 | SHG10417.1 | SAMN05444481_103384 | SAMN05444481_102150 | Glutamate synthase (NADH) large subunit. | Thioredoxin reductase (NADPH). | 0.835 |
SHG32746.1 | SHG42187.1 | SAMN05444481_103384 | SAMN05444481_104167 | Glutamate synthase (NADH) large subunit. | Thioredoxin reductase. | 0.835 |
SHG32746.1 | SHG62372.1 | SAMN05444481_103384 | SAMN05444481_1062 | Glutamate synthase (NADH) large subunit. | Thioredoxin reductase (NADPH). | 0.835 |
SHG32746.1 | SHH44687.1 | SAMN05444481_103384 | SAMN05444481_11760 | Glutamate synthase (NADH) large subunit. | Bacillithiol system protein YtxJ. | 0.751 |
SHG32746.1 | SHH54640.1 | SAMN05444481_103384 | SAMN05444481_11959 | Glutamate synthase (NADH) large subunit. | Pyridine nucleotide-disulphide oxidoreductase. | 0.835 |
SHG32746.1 | SHH58236.1 | SAMN05444481_103384 | SAMN05444481_12028 | Glutamate synthase (NADH) large subunit. | Thioredoxin reductase (NADPH). | 0.835 |
SHG32746.1 | fusA | SAMN05444481_103384 | SAMN05444481_10964 | Glutamate synthase (NADH) large subunit. | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.715 |
SHG42070.1 | SHH44687.1 | SAMN05444481_104162 | SAMN05444481_11760 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | Bacillithiol system protein YtxJ. | 0.701 |
SHG42070.1 | SHH58236.1 | SAMN05444481_104162 | SAMN05444481_12028 | Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. | Thioredoxin reductase (NADPH). | 0.672 |
SHG42187.1 | SHG32746.1 | SAMN05444481_104167 | SAMN05444481_103384 | Thioredoxin reductase. | Glutamate synthase (NADH) large subunit. | 0.835 |
SHG42187.1 | SHH44687.1 | SAMN05444481_104167 | SAMN05444481_11760 | Thioredoxin reductase. | Bacillithiol system protein YtxJ. | 0.766 |
SHG62372.1 | SHG10417.1 | SAMN05444481_1062 | SAMN05444481_102150 | Thioredoxin reductase (NADPH). | Thioredoxin reductase (NADPH). | 0.912 |
SHG62372.1 | SHG32746.1 | SAMN05444481_1062 | SAMN05444481_103384 | Thioredoxin reductase (NADPH). | Glutamate synthase (NADH) large subunit. | 0.835 |
SHG62372.1 | SHH44687.1 | SAMN05444481_1062 | SAMN05444481_11760 | Thioredoxin reductase (NADPH). | Bacillithiol system protein YtxJ. | 0.766 |
SHH44687.1 | SHG10417.1 | SAMN05444481_11760 | SAMN05444481_102150 | Bacillithiol system protein YtxJ. | Thioredoxin reductase (NADPH). | 0.766 |
SHH44687.1 | SHG32746.1 | SAMN05444481_11760 | SAMN05444481_103384 | Bacillithiol system protein YtxJ. | Glutamate synthase (NADH) large subunit. | 0.751 |
page 1 of 2