Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF99807.1 | SHG10757.1 | SAMN05444481_101403 | SAMN05444481_102163 | 4-hydroxy-tetrahydrodipicolinate reductase; Belongs to the DapB family. | Aspartate kinase. | 0.638 |
SHF99807.1 | SHG10788.1 | SAMN05444481_101403 | SAMN05444481_102164 | 4-hydroxy-tetrahydrodipicolinate reductase; Belongs to the DapB family. | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | 0.638 |
SHF99807.1 | SHG10852.1 | SAMN05444481_101403 | SAMN05444481_102167 | 4-hydroxy-tetrahydrodipicolinate reductase; Belongs to the DapB family. | Homoserine dehydrogenase. | 0.638 |
SHF99807.1 | SHH19350.1 | SAMN05444481_101403 | SAMN05444481_1139 | 4-hydroxy-tetrahydrodipicolinate reductase; Belongs to the DapB family. | N-acetylneuraminate lyase; Belongs to the DapA family. | 0.811 |
SHF99807.1 | SHH68650.1 | SAMN05444481_101403 | SAMN05444481_12370 | 4-hydroxy-tetrahydrodipicolinate reductase; Belongs to the DapB family. | Aspartate kinase. | 0.626 |
SHF99807.1 | asd | SAMN05444481_101403 | SAMN05444481_102353 | 4-hydroxy-tetrahydrodipicolinate reductase; Belongs to the DapB family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.754 |
SHF99807.1 | dapA | SAMN05444481_101403 | SAMN05444481_1179 | 4-hydroxy-tetrahydrodipicolinate reductase; Belongs to the DapB family. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.961 |
SHF99807.1 | dapB | SAMN05444481_101403 | SAMN05444481_1265 | 4-hydroxy-tetrahydrodipicolinate reductase; Belongs to the DapB family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.858 |
SHF99807.1 | lysA | SAMN05444481_101403 | SAMN05444481_103386 | 4-hydroxy-tetrahydrodipicolinate reductase; Belongs to the DapB family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.752 |
SHG10757.1 | SHF99807.1 | SAMN05444481_102163 | SAMN05444481_101403 | Aspartate kinase. | 4-hydroxy-tetrahydrodipicolinate reductase; Belongs to the DapB family. | 0.638 |
SHG10757.1 | SHG10788.1 | SAMN05444481_102163 | SAMN05444481_102164 | Aspartate kinase. | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | 0.999 |
SHG10757.1 | SHG10852.1 | SAMN05444481_102163 | SAMN05444481_102167 | Aspartate kinase. | Homoserine dehydrogenase. | 0.996 |
SHG10757.1 | SHH19350.1 | SAMN05444481_102163 | SAMN05444481_1139 | Aspartate kinase. | N-acetylneuraminate lyase; Belongs to the DapA family. | 0.876 |
SHG10757.1 | SHH68650.1 | SAMN05444481_102163 | SAMN05444481_12370 | Aspartate kinase. | Aspartate kinase. | 0.990 |
SHG10757.1 | asd | SAMN05444481_102163 | SAMN05444481_102353 | Aspartate kinase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.987 |
SHG10757.1 | dapA | SAMN05444481_102163 | SAMN05444481_1179 | Aspartate kinase. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.876 |
SHG10757.1 | dapB | SAMN05444481_102163 | SAMN05444481_1265 | Aspartate kinase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.638 |
SHG10757.1 | lysA | SAMN05444481_102163 | SAMN05444481_103386 | Aspartate kinase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.851 |
SHG10788.1 | SHF99807.1 | SAMN05444481_102164 | SAMN05444481_101403 | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | 4-hydroxy-tetrahydrodipicolinate reductase; Belongs to the DapB family. | 0.638 |
SHG10788.1 | SHG10757.1 | SAMN05444481_102164 | SAMN05444481_102163 | Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family. | Aspartate kinase. | 0.999 |
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