Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN89009.1 | ALN89010.1 | LG3211_0019 | LG3211_0020 | Tetratricopeptide repeat family protein. | Major Facilitator Superfamily protein. | 0.478 |
ALN89010.1 | ALN89009.1 | LG3211_0020 | LG3211_0019 | Major Facilitator Superfamily protein. | Tetratricopeptide repeat family protein. | 0.478 |
ALN89010.1 | ALN89011.1 | LG3211_0020 | LG3211_0021 | Major Facilitator Superfamily protein. | Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.533 |
ALN89010.1 | dltA-3 | LG3211_0020 | LG3211_3689 | Major Facilitator Superfamily protein. | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.464 |
ALN89010.1 | dltA-6 | LG3211_0020 | LG3211_3692 | Major Facilitator Superfamily protein. | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.464 |
ALN89010.1 | pheT | LG3211_0020 | LG3211_3533 | Major Facilitator Superfamily protein. | phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.452 |
ALN89011.1 | ALN89010.1 | LG3211_0021 | LG3211_0020 | Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Major Facilitator Superfamily protein. | 0.533 |
dltA-3 | ALN89010.1 | LG3211_3689 | LG3211_0020 | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | Major Facilitator Superfamily protein. | 0.464 |
dltA-3 | dltA-6 | LG3211_3689 | LG3211_3692 | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.999 |
dltA-6 | ALN89010.1 | LG3211_3692 | LG3211_0020 | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | Major Facilitator Superfamily protein. | 0.464 |
dltA-6 | dltA-3 | LG3211_3692 | LG3211_3689 | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.999 |
pheT | ALN89010.1 | LG3211_3533 | LG3211_0020 | phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Major Facilitator Superfamily protein. | 0.452 |