STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN89156.1Response regulator; [T] COG2200 FOG: EAL domain. (379 aa)    
Predicted Functional Partners:
ALN90541.1
Diguanylate cyclase domain protein.
  
 0.978
ALN91977.1
Diguanylate cyclase domain protein.
 
    0.973
ALN89155.1
Sensory box protein.
     0.840
ALN90846.1
Diguanylate cyclase domain protein; [T] COG2199 FOG: GGDEF domain.
 
    0.811
wspR
Response regulator.
  
 0.805
ALN92349.1
Diguanylate cyclase domain protein.
  
 0.793
ALN89390.1
Diguanylate cyclase domain protein.
 
 
 0.784
ALN93543.1
Diguanylate cyclase domain protein.
 
    0.779
ALN89154.1
Hypothetical protein.
       0.773
ALN90058.1
Diguanylate cyclase domain protein.
 
  
 0.771
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.