Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN89168.1 | ALN89169.1 | LG3211_0178 | LG3211_0179 | Bacterial regulatory, tetR family protein. | Zinc-binding dehydrogenase family protein. | 0.587 |
ALN89169.1 | ALN89168.1 | LG3211_0179 | LG3211_0178 | Zinc-binding dehydrogenase family protein. | Bacterial regulatory, tetR family protein. | 0.587 |
ALN89169.1 | ALN89170.1 | LG3211_0179 | LG3211_0180 | Zinc-binding dehydrogenase family protein. | TPR repeat family protein. | 0.497 |
ALN89169.1 | ALN91373.1 | LG3211_0179 | LG3211_2406 | Zinc-binding dehydrogenase family protein. | Phosphotransferase enzyme family protein. | 0.515 |
ALN89169.1 | ALN94305.1 | LG3211_0179 | LG3211_5373 | Zinc-binding dehydrogenase family protein. | 4-nitrobenzaldehyde reductase {multifunctional}. | 0.406 |
ALN89170.1 | ALN89169.1 | LG3211_0180 | LG3211_0179 | TPR repeat family protein. | Zinc-binding dehydrogenase family protein. | 0.497 |
ALN91373.1 | ALN89169.1 | LG3211_2406 | LG3211_0179 | Phosphotransferase enzyme family protein. | Zinc-binding dehydrogenase family protein. | 0.515 |
ALN94305.1 | ALN89169.1 | LG3211_5373 | LG3211_0179 | 4-nitrobenzaldehyde reductase {multifunctional}. | Zinc-binding dehydrogenase family protein. | 0.406 |