Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN89560.1 | ALN89561.1 | LG3211_0575 | LG3211_0576 | Methyltransferase domain protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | GDSL-like Lipase/Acylhydrolase family protein. | 0.864 |
ALN89560.1 | ALN89562.1 | LG3211_0575 | LG3211_0577 | Methyltransferase domain protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | Putative aminotransferase. | 0.866 |
ALN89560.1 | ALN89563.1 | LG3211_0575 | LG3211_0578 | Methyltransferase domain protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | Hypothetical protein. | 0.613 |
ALN89560.1 | rsgA | LG3211_0575 | LG3211_0579 | Methyltransferase domain protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.554 |
ALN89561.1 | ALN89560.1 | LG3211_0576 | LG3211_0575 | GDSL-like Lipase/Acylhydrolase family protein. | Methyltransferase domain protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.864 |
ALN89561.1 | ALN89562.1 | LG3211_0576 | LG3211_0577 | GDSL-like Lipase/Acylhydrolase family protein. | Putative aminotransferase. | 0.865 |
ALN89561.1 | ALN89563.1 | LG3211_0576 | LG3211_0578 | GDSL-like Lipase/Acylhydrolase family protein. | Hypothetical protein. | 0.613 |
ALN89561.1 | ALN92344.1 | LG3211_0576 | LG3211_3398 | GDSL-like Lipase/Acylhydrolase family protein. | Conserved hypothetical integral membrane family protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 0.621 |
ALN89561.1 | ALN94014.1 | LG3211_0576 | LG3211_5081 | GDSL-like Lipase/Acylhydrolase family protein. | WD40-like Beta Propeller Repeat family protein. | 0.450 |
ALN89561.1 | ALN94015.1 | LG3211_0576 | LG3211_5082 | GDSL-like Lipase/Acylhydrolase family protein. | WD40-like Beta Propeller Repeat family protein. | 0.459 |
ALN89561.1 | rsgA | LG3211_0576 | LG3211_0579 | GDSL-like Lipase/Acylhydrolase family protein. | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.527 |
ALN89562.1 | ALN89560.1 | LG3211_0577 | LG3211_0575 | Putative aminotransferase. | Methyltransferase domain protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.866 |
ALN89562.1 | ALN89561.1 | LG3211_0577 | LG3211_0576 | Putative aminotransferase. | GDSL-like Lipase/Acylhydrolase family protein. | 0.865 |
ALN89562.1 | ALN89563.1 | LG3211_0577 | LG3211_0578 | Putative aminotransferase. | Hypothetical protein. | 0.613 |
ALN89562.1 | rsgA | LG3211_0577 | LG3211_0579 | Putative aminotransferase. | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.530 |
ALN89563.1 | ALN89560.1 | LG3211_0578 | LG3211_0575 | Hypothetical protein. | Methyltransferase domain protein; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.613 |
ALN89563.1 | ALN89561.1 | LG3211_0578 | LG3211_0576 | Hypothetical protein. | GDSL-like Lipase/Acylhydrolase family protein. | 0.613 |
ALN89563.1 | ALN89562.1 | LG3211_0578 | LG3211_0577 | Hypothetical protein. | Putative aminotransferase. | 0.613 |
ALN89563.1 | rsgA | LG3211_0578 | LG3211_0579 | Hypothetical protein. | Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.562 |
ALN92344.1 | ALN89561.1 | LG3211_3398 | LG3211_0576 | Conserved hypothetical integral membrane family protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | GDSL-like Lipase/Acylhydrolase family protein. | 0.621 |
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