Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALN90684.1 | ALN91852.1 | LG3211_1709 | LG3211_2888 | thiS family protein. | thiF family protein. | 0.988 |
| ALN90684.1 | thiG | LG3211_1709 | LG3211_1040 | thiS family protein. | Thiazole biosynthesis ThiG family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.802 |
| ALN91852.1 | ALN90684.1 | LG3211_2888 | LG3211_1709 | thiF family protein. | thiS family protein. | 0.988 |
| ALN91852.1 | ALN93001.1 | LG3211_2888 | LG3211_4065 | thiF family protein. | Mutator mutT family protein; [H] COG0352 Thiamine monophosphate synthase. | 0.823 |
| ALN91852.1 | thiC | LG3211_2888 | LG3211_0885 | thiF family protein. | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.838 |
| ALN91852.1 | thiD | LG3211_2888 | LG3211_3181 | thiF family protein. | Phosphomethylpyrimidine kinase. | 0.828 |
| ALN91852.1 | thiE | LG3211_2888 | LG3211_0921 | thiF family protein. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.777 |
| ALN91852.1 | thiG | LG3211_2888 | LG3211_1040 | thiF family protein. | Thiazole biosynthesis ThiG family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.974 |
| ALN91852.1 | thiS | LG3211_2888 | LG3211_1044 | thiF family protein. | Thiamine biosynthesis protein ThiS. | 0.945 |
| ALN93001.1 | ALN91852.1 | LG3211_4065 | LG3211_2888 | Mutator mutT family protein; [H] COG0352 Thiamine monophosphate synthase. | thiF family protein. | 0.823 |
| ALN93001.1 | thiC | LG3211_4065 | LG3211_0885 | Mutator mutT family protein; [H] COG0352 Thiamine monophosphate synthase. | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.836 |
| ALN93001.1 | thiD | LG3211_4065 | LG3211_3181 | Mutator mutT family protein; [H] COG0352 Thiamine monophosphate synthase. | Phosphomethylpyrimidine kinase. | 0.821 |
| ALN93001.1 | thiE | LG3211_4065 | LG3211_0921 | Mutator mutT family protein; [H] COG0352 Thiamine monophosphate synthase. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.600 |
| ALN93001.1 | thiG | LG3211_4065 | LG3211_1040 | Mutator mutT family protein; [H] COG0352 Thiamine monophosphate synthase. | Thiazole biosynthesis ThiG family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.804 |
| ALN93001.1 | thiS | LG3211_4065 | LG3211_1044 | Mutator mutT family protein; [H] COG0352 Thiamine monophosphate synthase. | Thiamine biosynthesis protein ThiS. | 0.776 |
| dadA | thiG | LG3211_4610 | LG3211_1040 | Pyridine nucleotide-disulfide oxidoreductase family protein; Oxidative deamination of D-amino acids. | Thiazole biosynthesis ThiG family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.891 |
| dxs | thiG | LG3211_3524 | LG3211_1040 | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | Thiazole biosynthesis ThiG family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.929 |
| thiC | ALN91852.1 | LG3211_0885 | LG3211_2888 | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | thiF family protein. | 0.838 |
| thiC | ALN93001.1 | LG3211_0885 | LG3211_4065 | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Mutator mutT family protein; [H] COG0352 Thiamine monophosphate synthase. | 0.836 |
| thiC | thiD | LG3211_0885 | LG3211_3181 | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Phosphomethylpyrimidine kinase. | 0.988 |
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