STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN90317.1Hypothetical protein. (511 aa)    
Predicted Functional Partners:
ALN90318.1
Hypothetical protein.
 
     0.955
ALN90319.1
recF/RecN/SMC N terminal domain protein.
 
     0.955
ALN93370.1
Hypothetical protein.
  
     0.601
ALN90305.1
Alpha/beta hydrolase family protein.
  
     0.550
ALN92062.1
Histone H1-like nucleoHC2 family protein.
  
     0.546
ALN91833.1
Hypothetical protein.
  
     0.532
ALN90068.1
PDZ domain family protein.
  
     0.516
ALN92786.1
Hypothetical protein.
  
     0.504
ALN93963.1
Hypothetical protein.
  
     0.502
ALN91536.1
Calx-beta domain protein.
  
     0.490
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.