Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN90493.1 | ALN90494.1 | LG3211_1517 | LG3211_1518 | Putative transmembrane protein. | lysM domain protein. | 0.759 |
ALN90493.1 | ALN90495.1 | LG3211_1517 | LG3211_1519 | Putative transmembrane protein. | Hypothetical protein. | 0.468 |
ALN90493.1 | pcm | LG3211_1517 | LG3211_1516 | Putative transmembrane protein. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.824 |
ALN90493.1 | surE | LG3211_1517 | LG3211_1515 | Putative transmembrane protein. | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.823 |
ALN90494.1 | ALN90493.1 | LG3211_1518 | LG3211_1517 | lysM domain protein. | Putative transmembrane protein. | 0.759 |
ALN90494.1 | ALN90495.1 | LG3211_1518 | LG3211_1519 | lysM domain protein. | Hypothetical protein. | 0.675 |
ALN90494.1 | ALN90496.1 | LG3211_1518 | LG3211_1520 | lysM domain protein. | Hypothetical protein. | 0.537 |
ALN90494.1 | pcm | LG3211_1518 | LG3211_1516 | lysM domain protein. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.737 |
ALN90494.1 | surE | LG3211_1518 | LG3211_1515 | lysM domain protein. | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.858 |
ALN90495.1 | ALN90493.1 | LG3211_1519 | LG3211_1517 | Hypothetical protein. | Putative transmembrane protein. | 0.468 |
ALN90495.1 | ALN90494.1 | LG3211_1519 | LG3211_1518 | Hypothetical protein. | lysM domain protein. | 0.675 |
ALN90495.1 | ALN90496.1 | LG3211_1519 | LG3211_1520 | Hypothetical protein. | Hypothetical protein. | 0.627 |
ALN90495.1 | pcm | LG3211_1519 | LG3211_1516 | Hypothetical protein. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.419 |
ALN90495.1 | surE | LG3211_1519 | LG3211_1515 | Hypothetical protein. | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.419 |
ALN90496.1 | ALN90494.1 | LG3211_1520 | LG3211_1518 | Hypothetical protein. | lysM domain protein. | 0.537 |
ALN90496.1 | ALN90495.1 | LG3211_1520 | LG3211_1519 | Hypothetical protein. | Hypothetical protein. | 0.627 |
pcm | ALN90493.1 | LG3211_1516 | LG3211_1517 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Putative transmembrane protein. | 0.824 |
pcm | ALN90494.1 | LG3211_1516 | LG3211_1518 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | lysM domain protein. | 0.737 |
pcm | ALN90495.1 | LG3211_1516 | LG3211_1519 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Hypothetical protein. | 0.419 |
pcm | surE | LG3211_1516 | LG3211_1515 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.971 |
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