STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN90536.1Methyltransferase domain protein. (299 aa)    
Predicted Functional Partners:
ALN93970.1
M61 glycyl aminopeptidase family protein.
  
     0.647
ALN92775.1
Hypothetical protein.
  
     0.639
ALN92415.1
Hypothetical protein.
  
     0.540
ALN93793.1
Phage tail family protein.
  
     0.500
ALN89624.1
Hypothetical protein.
  
     0.470
ALN89035.1
Acetyltransferase family protein.
  
     0.464
ALN93751.1
RHS repeat-associated core domain protein.
  
     0.452
ALN92640.1
RHS Repeat family protein.
  
     0.445
ALN91239.1
Hypothetical protein.
  
     0.443
ALN89731.1
Hypothetical protein.
  
     0.440
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.