STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN90787.1glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein. (137 aa)    
Predicted Functional Partners:
ALN90786.1
Bacterial regulatory helix-turn-helix, AraC family protein.
 
     0.919
ALN89012.1
Bacterial regulatory helix-turn-helix, AraC family protein.
  
     0.513
ALN90152.1
Bacterial regulatory helix-turn-helix, AraC family protein; [K] COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
     0.513
ALN90789.1
ABC transporter family protein; [L] COG0178 Excinuclease ATPase subunit.
  
     0.508
ALN93235.1
Hypothetical protein.
  
     0.454
ALN93265.1
Bacterial regulatory helix-turn-helix, AraC family protein.
  
     0.440
ALN90785.1
Autotransporter beta-domain protein.
       0.430
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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