STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xghAXyloglucanase Xgh74A. (721 aa)    
Predicted Functional Partners:
ALN90807.1
Putative alpha-L-fucosidase.
 
     0.820
ALN90805.1
Beta-galactosidase family protein.
 
     0.748
ALN89292.1
Pectate lyase family protein.
  
     0.739
ALN90804.1
Glycosyl hydrolases family 2, sugar binding domain protein.
 
     0.736
ALN90803.1
Glycosyl hydrolases family 2, sugar binding domain protein; Belongs to the glycosyl hydrolase 2 family.
       0.727
ALN90806.1
'[G] COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases'; Belongs to the glycosyl hydrolase 31 family.
 
     0.707
ALN89291.1
Pectate lyase family protein.
 
     0.618
xylB
Xylulokinase.
       0.553
ALN90677.1
Hypothetical protein.
  
     0.528
ALN90801.1
tonB-dependent receptor family protein.
 
     0.525
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.