STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phbB-3acetoacetyl-CoA reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)    
Predicted Functional Partners:
phaC
poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit.
  
 
 0.941
phbB-2
acetoacetyl-CoA reductase family protein.
 
  
 
0.931
ALN90719.1
enoyl-CoA hydratase/isomerase family protein.
  
 0.916
phaE
poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit.
  
  
  0.916
ALN91863.1
enoyl-CoA hydratase/isomerase family protein.
  
 0.916
phbB
acetoacetyl-CoA reductase family protein.
  
  
 
0.906
ALN89318.1
Putative ACETYL-COA ACYLTRANSFERASE FADA2; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
  0.904
ALN91005.1
acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
  0.904
ALN93097.1
3-oxoacid CoA-transferase, B subunit.
  
 0.904
ALN93098.1
'[I] COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit'.
  
 
 0.901
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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