Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN90722.1 | ALN90855.1 | LG3211_1748 | LG3211_1885 | Anti sigma-E RseA, N-terminal domain protein. | Hypothetical protein. | 0.414 |
ALN90852.1 | ALN90853.1 | LG3211_1882 | LG3211_1883 | Major Facilitator Superfamily protein. | fe-S metabolism associated domain protein. | 0.864 |
ALN90852.1 | ALN90855.1 | LG3211_1882 | LG3211_1885 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.502 |
ALN90852.1 | cysS | LG3211_1882 | LG3211_1884 | Major Facilitator Superfamily protein. | cysteine--tRNA ligase; [J] COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.864 |
ALN90853.1 | ALN90852.1 | LG3211_1883 | LG3211_1882 | fe-S metabolism associated domain protein. | Major Facilitator Superfamily protein. | 0.864 |
ALN90853.1 | ALN90855.1 | LG3211_1883 | LG3211_1885 | fe-S metabolism associated domain protein. | Hypothetical protein. | 0.612 |
ALN90853.1 | cysS | LG3211_1883 | LG3211_1884 | fe-S metabolism associated domain protein. | cysteine--tRNA ligase; [J] COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.864 |
ALN90855.1 | ALN90722.1 | LG3211_1885 | LG3211_1748 | Hypothetical protein. | Anti sigma-E RseA, N-terminal domain protein. | 0.414 |
ALN90855.1 | ALN90852.1 | LG3211_1885 | LG3211_1882 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.502 |
ALN90855.1 | ALN90853.1 | LG3211_1885 | LG3211_1883 | Hypothetical protein. | fe-S metabolism associated domain protein. | 0.612 |
ALN90855.1 | ALN90856.1 | LG3211_1885 | LG3211_1886 | Hypothetical protein. | Hypothetical protein. | 0.603 |
ALN90855.1 | argF | LG3211_1885 | LG3211_1887 | Hypothetical protein. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.507 |
ALN90855.1 | cysS | LG3211_1885 | LG3211_1884 | Hypothetical protein. | cysteine--tRNA ligase; [J] COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.669 |
ALN90856.1 | ALN90855.1 | LG3211_1886 | LG3211_1885 | Hypothetical protein. | Hypothetical protein. | 0.603 |
ALN90856.1 | argF | LG3211_1886 | LG3211_1887 | Hypothetical protein. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.440 |
argF | ALN90855.1 | LG3211_1887 | LG3211_1885 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Hypothetical protein. | 0.507 |
argF | ALN90856.1 | LG3211_1887 | LG3211_1886 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Hypothetical protein. | 0.440 |
argF | cysS | LG3211_1887 | LG3211_1884 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | cysteine--tRNA ligase; [J] COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.486 |
cysS | ALN90852.1 | LG3211_1884 | LG3211_1882 | cysteine--tRNA ligase; [J] COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Major Facilitator Superfamily protein. | 0.864 |
cysS | ALN90853.1 | LG3211_1884 | LG3211_1883 | cysteine--tRNA ligase; [J] COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | fe-S metabolism associated domain protein. | 0.864 |
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