Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN89235.1 | ALN89236.1 | LG3211_0245 | LG3211_0246 | Hypothetical protein. | RNA polymerase sigma factor, sigma-70 family protein. | 0.623 |
ALN89235.1 | ALN91044.1 | LG3211_0245 | LG3211_2075 | Hypothetical protein. | YCII-related domain protein. | 0.445 |
ALN89236.1 | ALN89235.1 | LG3211_0246 | LG3211_0245 | RNA polymerase sigma factor, sigma-70 family protein. | Hypothetical protein. | 0.623 |
ALN89236.1 | ALN90542.1 | LG3211_0246 | LG3211_1566 | RNA polymerase sigma factor, sigma-70 family protein. | YCII-related domain protein. | 0.693 |
ALN89236.1 | ALN91044.1 | LG3211_0246 | LG3211_2075 | RNA polymerase sigma factor, sigma-70 family protein. | YCII-related domain protein. | 0.785 |
ALN90542.1 | ALN89236.1 | LG3211_1566 | LG3211_0246 | YCII-related domain protein. | RNA polymerase sigma factor, sigma-70 family protein. | 0.693 |
ALN90542.1 | ALN91044.1 | LG3211_1566 | LG3211_2075 | YCII-related domain protein. | YCII-related domain protein. | 0.726 |
ALN91044.1 | ALN89235.1 | LG3211_2075 | LG3211_0245 | YCII-related domain protein. | Hypothetical protein. | 0.445 |
ALN91044.1 | ALN89236.1 | LG3211_2075 | LG3211_0246 | YCII-related domain protein. | RNA polymerase sigma factor, sigma-70 family protein. | 0.785 |
ALN91044.1 | ALN90542.1 | LG3211_2075 | LG3211_1566 | YCII-related domain protein. | YCII-related domain protein. | 0.726 |