STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN91356.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
ALN91355.1
Hypothetical protein.
       0.708
ALN91351.1
motA/TolQ/ExbB proton channel family protein.
       0.539
ALN91354.1
Hypothetical protein.
       0.530
ALN91353.1
tonB family C-terminal domain protein.
       0.526
ALN91349.1
Surface antigen family protein.
       0.497
ALN91350.1
Hypothetical protein.
       0.497
ALN91352.1
Biopolymer transport ExbD/TolR family protein.
       0.497
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.