Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALN89359.1 | ALN92788.1 | LG3211_0369 | LG3211_3851 | AAA domain family protein. | 5'-3' exonuclease, C-terminal SAM fold family protein. | 0.730 |
| ALN89359.1 | dnaN | LG3211_0369 | LG3211_0002 | AAA domain family protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.523 |
| ALN89359.1 | holB | LG3211_0369 | LG3211_1743 | AAA domain family protein. | DNA polymerase III, delta' subunit. | 0.612 |
| ALN89359.1 | ligD | LG3211_0369 | LG3211_2416 | AAA domain family protein. | DNA ligase D. | 0.706 |
| ALN89359.1 | polA | LG3211_0369 | LG3211_5028 | AAA domain family protein. | DNA polymerase I family protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.906 |
| ALN90422.1 | ALN94146.1 | LG3211_1446 | LG3211_5213 | Hypothetical protein. | Eukaryotic DNA topoisomerase I, catalytic core family protein. | 0.495 |
| ALN90422.1 | ku | LG3211_1446 | LG3211_2415 | Hypothetical protein. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.525 |
| ALN90422.1 | ligD | LG3211_1446 | LG3211_2416 | Hypothetical protein. | DNA ligase D. | 0.735 |
| ALN91381.1 | ku | LG3211_2414 | LG3211_2415 | Low affinity iron permease family protein. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.839 |
| ALN91381.1 | ligD | LG3211_2414 | LG3211_2416 | Low affinity iron permease family protein. | DNA ligase D. | 0.749 |
| ALN92788.1 | ALN89359.1 | LG3211_3851 | LG3211_0369 | 5'-3' exonuclease, C-terminal SAM fold family protein. | AAA domain family protein. | 0.730 |
| ALN92788.1 | dnaN | LG3211_3851 | LG3211_0002 | 5'-3' exonuclease, C-terminal SAM fold family protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.939 |
| ALN92788.1 | holB | LG3211_3851 | LG3211_1743 | 5'-3' exonuclease, C-terminal SAM fold family protein. | DNA polymerase III, delta' subunit. | 0.798 |
| ALN92788.1 | ligD | LG3211_3851 | LG3211_2416 | 5'-3' exonuclease, C-terminal SAM fold family protein. | DNA ligase D. | 0.881 |
| ALN92788.1 | polA | LG3211_3851 | LG3211_5028 | 5'-3' exonuclease, C-terminal SAM fold family protein. | DNA polymerase I family protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.966 |
| ALN94146.1 | ALN90422.1 | LG3211_5213 | LG3211_1446 | Eukaryotic DNA topoisomerase I, catalytic core family protein. | Hypothetical protein. | 0.495 |
| ALN94146.1 | ku | LG3211_5213 | LG3211_2415 | Eukaryotic DNA topoisomerase I, catalytic core family protein. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.695 |
| ALN94146.1 | ligD | LG3211_5213 | LG3211_2416 | Eukaryotic DNA topoisomerase I, catalytic core family protein. | DNA ligase D. | 0.788 |
| ALN94146.1 | polA | LG3211_5213 | LG3211_5028 | Eukaryotic DNA topoisomerase I, catalytic core family protein. | DNA polymerase I family protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.409 |
| dnaN | ALN89359.1 | LG3211_0002 | LG3211_0369 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | AAA domain family protein. | 0.523 |
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