Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN89074.1 | ALN91525.1 | LG3211_0084 | LG3211_2558 | vacJ like lipofamily protein. | Gram-negative porin family protein. | 0.800 |
ALN90288.1 | ALN91525.1 | LG3211_1312 | LG3211_2558 | PIN domain protein. | Gram-negative porin family protein. | 0.472 |
ALN90288.1 | ALN93639.1 | LG3211_1312 | LG3211_4705 | PIN domain protein. | Hypothetical protein. | 0.423 |
ALN91525.1 | ALN89074.1 | LG3211_2558 | LG3211_0084 | Gram-negative porin family protein. | vacJ like lipofamily protein. | 0.800 |
ALN91525.1 | ALN90288.1 | LG3211_2558 | LG3211_1312 | Gram-negative porin family protein. | PIN domain protein. | 0.472 |
ALN91525.1 | ALN91526.1 | LG3211_2558 | LG3211_2559 | Gram-negative porin family protein. | Putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.601 |
ALN91525.1 | ALN91527.1 | LG3211_2558 | LG3211_2560 | Gram-negative porin family protein. | Major Facilitator Superfamily protein. | 0.462 |
ALN91525.1 | ALN92037.1 | LG3211_2558 | LG3211_3079 | Gram-negative porin family protein. | WD40-like Beta Propeller Repeat family protein. | 0.696 |
ALN91525.1 | ALN93451.1 | LG3211_2558 | LG3211_4517 | Gram-negative porin family protein. | Rhodanese-like domain protein. | 0.560 |
ALN91525.1 | ALN93636.1 | LG3211_2558 | LG3211_4702 | Gram-negative porin family protein. | Hypothetical protein. | 0.626 |
ALN91525.1 | ALN93638.1 | LG3211_2558 | LG3211_4704 | Gram-negative porin family protein. | Hypothetical protein. | 0.636 |
ALN91525.1 | ALN93639.1 | LG3211_2558 | LG3211_4705 | Gram-negative porin family protein. | Hypothetical protein. | 0.655 |
ALN91525.1 | tolB | LG3211_2558 | LG3211_3984 | Gram-negative porin family protein. | tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.696 |
ALN91526.1 | ALN91525.1 | LG3211_2559 | LG3211_2558 | Putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Gram-negative porin family protein. | 0.601 |
ALN91526.1 | ALN91527.1 | LG3211_2559 | LG3211_2560 | Putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Major Facilitator Superfamily protein. | 0.590 |
ALN91527.1 | ALN91525.1 | LG3211_2560 | LG3211_2558 | Major Facilitator Superfamily protein. | Gram-negative porin family protein. | 0.462 |
ALN91527.1 | ALN91526.1 | LG3211_2560 | LG3211_2559 | Major Facilitator Superfamily protein. | Putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.590 |
ALN92037.1 | ALN91525.1 | LG3211_3079 | LG3211_2558 | WD40-like Beta Propeller Repeat family protein. | Gram-negative porin family protein. | 0.696 |
ALN92037.1 | tolB | LG3211_3079 | LG3211_3984 | WD40-like Beta Propeller Repeat family protein. | tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.582 |
ALN93451.1 | ALN91525.1 | LG3211_4517 | LG3211_2558 | Rhodanese-like domain protein. | Gram-negative porin family protein. | 0.560 |
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