Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN89977.1 | ALN91588.1 | LG3211_1000 | LG3211_2621 | Hypothetical protein. | FAD binding domain protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.435 |
ALN89977.1 | ALN91868.1 | LG3211_1000 | LG3211_2904 | Hypothetical protein. | Pyridine nucleotide-disulfide oxidoreductase family protein. | 0.435 |
ALN89977.1 | dltA-3 | LG3211_1000 | LG3211_3689 | Hypothetical protein. | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.434 |
ALN89977.1 | dltA-6 | LG3211_1000 | LG3211_3692 | Hypothetical protein. | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.434 |
ALN91088.1 | ALN91588.1 | LG3211_2119 | LG3211_2621 | Glutamine amidotransferase class-I family protein. | FAD binding domain protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.420 |
ALN91088.1 | ALN91868.1 | LG3211_2119 | LG3211_2904 | Glutamine amidotransferase class-I family protein. | Pyridine nucleotide-disulfide oxidoreductase family protein. | 0.562 |
ALN91587.1 | ALN91588.1 | LG3211_2620 | LG3211_2621 | Hypothetical protein. | FAD binding domain protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.549 |
ALN91588.1 | ALN89977.1 | LG3211_2621 | LG3211_1000 | FAD binding domain protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). | Hypothetical protein. | 0.435 |
ALN91588.1 | ALN91088.1 | LG3211_2621 | LG3211_2119 | FAD binding domain protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). | Glutamine amidotransferase class-I family protein. | 0.420 |
ALN91588.1 | ALN91587.1 | LG3211_2621 | LG3211_2620 | FAD binding domain protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). | Hypothetical protein. | 0.549 |
ALN91588.1 | ALN91868.1 | LG3211_2621 | LG3211_2904 | FAD binding domain protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). | Pyridine nucleotide-disulfide oxidoreductase family protein. | 0.595 |
ALN91588.1 | ALN93244.1 | LG3211_2621 | LG3211_4310 | FAD binding domain protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). | N-acetylmuramoyl-L-alanine amidase family protein. | 0.524 |
ALN91588.1 | ALN93488.1 | LG3211_2621 | LG3211_4554 | FAD binding domain protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). | FAD binding domain protein. | 0.489 |
ALN91588.1 | dltA-3 | LG3211_2621 | LG3211_3689 | FAD binding domain protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.525 |
ALN91588.1 | dltA-6 | LG3211_2621 | LG3211_3692 | FAD binding domain protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.525 |
ALN91868.1 | ALN89977.1 | LG3211_2904 | LG3211_1000 | Pyridine nucleotide-disulfide oxidoreductase family protein. | Hypothetical protein. | 0.435 |
ALN91868.1 | ALN91088.1 | LG3211_2904 | LG3211_2119 | Pyridine nucleotide-disulfide oxidoreductase family protein. | Glutamine amidotransferase class-I family protein. | 0.562 |
ALN91868.1 | ALN91588.1 | LG3211_2904 | LG3211_2621 | Pyridine nucleotide-disulfide oxidoreductase family protein. | FAD binding domain protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.595 |
ALN91868.1 | ALN93488.1 | LG3211_2904 | LG3211_4554 | Pyridine nucleotide-disulfide oxidoreductase family protein. | FAD binding domain protein. | 0.489 |
ALN91868.1 | dltA-3 | LG3211_2904 | LG3211_3689 | Pyridine nucleotide-disulfide oxidoreductase family protein. | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.525 |
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