Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN91620.1 | ALN91621.1 | LG3211_2653 | LG3211_2654 | Putative transmembrane protein. | Hypothetical protein. | 0.864 |
ALN91620.1 | ALN91622.1 | LG3211_2653 | LG3211_2655 | Putative transmembrane protein. | Short chain dehydrogenase family protein. | 0.798 |
ALN91620.1 | asnS | LG3211_2653 | LG3211_2652 | Putative transmembrane protein. | asparagine--tRNA ligase. | 0.718 |
ALN91621.1 | ALN91620.1 | LG3211_2654 | LG3211_2653 | Hypothetical protein. | Putative transmembrane protein. | 0.864 |
ALN91621.1 | ALN91622.1 | LG3211_2654 | LG3211_2655 | Hypothetical protein. | Short chain dehydrogenase family protein. | 0.798 |
ALN91621.1 | asnS | LG3211_2654 | LG3211_2652 | Hypothetical protein. | asparagine--tRNA ligase. | 0.718 |
ALN91622.1 | ALN91620.1 | LG3211_2655 | LG3211_2653 | Short chain dehydrogenase family protein. | Putative transmembrane protein. | 0.798 |
ALN91622.1 | ALN91621.1 | LG3211_2655 | LG3211_2654 | Short chain dehydrogenase family protein. | Hypothetical protein. | 0.798 |
ALN91622.1 | ALN92565.1 | LG3211_2655 | LG3211_3623 | Short chain dehydrogenase family protein. | 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein. | 0.905 |
ALN91622.1 | ALN93982.1 | LG3211_2655 | LG3211_5049 | Short chain dehydrogenase family protein. | Beta-ketoacyl synthase, C-terminal domain protein; [IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.930 |
ALN91622.1 | ALN93993.1 | LG3211_2655 | LG3211_5060 | Short chain dehydrogenase family protein. | fabA-like domain protein. | 0.918 |
ALN91622.1 | asnS | LG3211_2655 | LG3211_2652 | Short chain dehydrogenase family protein. | asparagine--tRNA ligase. | 0.690 |
ALN91622.1 | dltA-3 | LG3211_2655 | LG3211_3689 | Short chain dehydrogenase family protein. | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.685 |
ALN91622.1 | fabF | LG3211_2655 | LG3211_1739 | Short chain dehydrogenase family protein. | Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.928 |
ALN91622.1 | fabH-2 | LG3211_2655 | LG3211_1733 | Short chain dehydrogenase family protein. | 3-oxoacyl-[acyl-carrier-] synthase III family protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.905 |
ALN91622.1 | fabZ | LG3211_2655 | LG3211_3329 | Short chain dehydrogenase family protein. | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.919 |
ALN92565.1 | ALN91622.1 | LG3211_3623 | LG3211_2655 | 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein. | Short chain dehydrogenase family protein. | 0.905 |
ALN92565.1 | ALN93982.1 | LG3211_3623 | LG3211_5049 | 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein. | Beta-ketoacyl synthase, C-terminal domain protein; [IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.984 |
ALN92565.1 | ALN93993.1 | LG3211_3623 | LG3211_5060 | 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein. | fabA-like domain protein. | 0.622 |
ALN92565.1 | dltA-3 | LG3211_3623 | LG3211_3689 | 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein. | D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.836 |
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