STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN91626.1Von Willebrand factor type A domain protein. (297 aa)    
Predicted Functional Partners:
ALN91625.1
N-terminal double-transmembrane domain protein.
 
  
 0.966
ALN91624.1
Putative transmembrane protein.
 
     0.965
ALN91623.1
Putative transmembrane protein.
 
     0.964
ALN91627.1
AAA domain family protein.
 
  
 0.939
ALN91628.1
Hypothetical protein.
 
    0.854
ALN91630.1
Modulator of DNA gyrase family protein; [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs.
 
     0.804
ALN91629.1
Modulator of DNA gyrase family protein.
 
     0.773
ALN91631.1
Modulator of DNA gyrase family protein; [R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs.
 
     0.771
ALN89956.1
AAA domain family protein; [R] COG0714 MoxR-like ATPases.
 
  
 0.695
moxR2
Magnesium chelatase, putative.
 
  
 0.694
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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