STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN92518.1Baseplate J-like family protein. (296 aa)    
Predicted Functional Partners:
ALN92510.1
Phage Tail Protein X family protein.
 
 
 0.985
ALN92528.1
Phage P2 GpU family protein.
 
 
 0.985
ALN92523.1
Gene 25-like lysozyme family protein.
 
 
 0.983
ALN92525.1
[R] COG3498 Phage tail tube protein FII.
 
 
 0.983
fi
Major tail sheath protein.
 
   0.982
ALN92519.1
Phage tail protein I.
  
 
 0.963
ALN92522.1
Phage baseplate assembly V family protein.
 
  
 0.953
ALN92529.1
Phage late control gene D family protein.
 
  
 0.953
ALN92515.1
P2 phage tail completion R family protein.
 
    0.866
ALN92508.1
Phage small terminase subunit.
 
    0.865
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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