STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glk-2Glucokinase; Belongs to the bacterial glucokinase family. (344 aa)    
Predicted Functional Partners:
ALN89162.1
Glucokinase family protein; Belongs to the bacterial glucokinase family.
  
  
 
0.922
ALN89287.1
Aldose 1-epimerase family protein.
  
  
 0.920
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.916
ALN89434.1
Phosphoglucomutase/phosphomannomutase, C-terminal domain protein.
     
 0.911
pgm
Phosphoglucomutase, alpha-D-glucose phosphate-specific; [G] COG0033 Phosphoglucomutase.
     
 0.911
glk
Glucokinase; Belongs to the bacterial glucokinase family.
  
  
 
0.904
ALN93101.1
Aldose 1-epimerase family protein; Belongs to the glucose-6-phosphate 1-epimerase family.
     
 0.901
ALN89279.1
Beta galactosidase small chain family protein.
     
  0.900
zwf
Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 0.887
zwf-2
Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 0.885
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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