Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN92646.1 | ALN92648.1 | LG3211_3704 | LG3211_3706 | Prolyl oligopeptidase family protein; [Q] COG0412 Dienelactone hydrolase and related enzymes. | Hypothetical protein. | 0.539 |
ALN92646.1 | ALN92650.1 | LG3211_3704 | LG3211_3708 | Prolyl oligopeptidase family protein; [Q] COG0412 Dienelactone hydrolase and related enzymes. | Phenazine biosynthesis, PhzF family protein. | 0.431 |
ALN92646.1 | murD | LG3211_3704 | LG3211_3705 | Prolyl oligopeptidase family protein; [Q] COG0412 Dienelactone hydrolase and related enzymes. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.539 |
ALN92648.1 | ALN92646.1 | LG3211_3706 | LG3211_3704 | Hypothetical protein. | Prolyl oligopeptidase family protein; [Q] COG0412 Dienelactone hydrolase and related enzymes. | 0.539 |
ALN92648.1 | ALN92650.1 | LG3211_3706 | LG3211_3708 | Hypothetical protein. | Phenazine biosynthesis, PhzF family protein. | 0.699 |
ALN92648.1 | murD | LG3211_3706 | LG3211_3705 | Hypothetical protein. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.999 |
ALN92650.1 | ALN92646.1 | LG3211_3708 | LG3211_3704 | Phenazine biosynthesis, PhzF family protein. | Prolyl oligopeptidase family protein; [Q] COG0412 Dienelactone hydrolase and related enzymes. | 0.431 |
ALN92650.1 | ALN92648.1 | LG3211_3708 | LG3211_3706 | Phenazine biosynthesis, PhzF family protein. | Hypothetical protein. | 0.699 |
ALN92650.1 | murD | LG3211_3708 | LG3211_3705 | Phenazine biosynthesis, PhzF family protein. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.587 |
murD | ALN92646.1 | LG3211_3705 | LG3211_3704 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | Prolyl oligopeptidase family protein; [Q] COG0412 Dienelactone hydrolase and related enzymes. | 0.539 |
murD | ALN92648.1 | LG3211_3705 | LG3211_3706 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | Hypothetical protein. | 0.999 |
murD | ALN92650.1 | LG3211_3705 | LG3211_3708 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | Phenazine biosynthesis, PhzF family protein. | 0.587 |