Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN89577.1 | ALN92897.1 | LG3211_0592 | LG3211_3960 | NADPH-dependent FMN reductase family protein. | Ferritin-like domain protein; Belongs to the Dps family. | 0.477 |
ALN90304.1 | ALN92897.1 | LG3211_1328 | LG3211_3960 | Peroxiredoxin, OsmC subfamily protein. | Ferritin-like domain protein; Belongs to the Dps family. | 0.484 |
ALN91116.1 | ALN92897.1 | LG3211_2147 | LG3211_3960 | Sigma 54 modulation / S30EA ribosomal family protein. | Ferritin-like domain protein; Belongs to the Dps family. | 0.536 |
ALN92897.1 | ALN89577.1 | LG3211_3960 | LG3211_0592 | Ferritin-like domain protein; Belongs to the Dps family. | NADPH-dependent FMN reductase family protein. | 0.477 |
ALN92897.1 | ALN90304.1 | LG3211_3960 | LG3211_1328 | Ferritin-like domain protein; Belongs to the Dps family. | Peroxiredoxin, OsmC subfamily protein. | 0.484 |
ALN92897.1 | ALN91116.1 | LG3211_3960 | LG3211_2147 | Ferritin-like domain protein; Belongs to the Dps family. | Sigma 54 modulation / S30EA ribosomal family protein. | 0.536 |
ALN92897.1 | ahpC | LG3211_3960 | LG3211_3871 | Ferritin-like domain protein; Belongs to the Dps family. | Alkyl hydroperoxide reductase subunit C. | 0.699 |
ALN92897.1 | clpS | LG3211_3960 | LG3211_2358 | Ferritin-like domain protein; Belongs to the Dps family. | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.824 |
ALN92897.1 | hrpA | LG3211_3960 | LG3211_3959 | Ferritin-like domain protein; Belongs to the Dps family. | ATP-dependent helicase HrpA. | 0.611 |
ALN92897.1 | raiA | LG3211_3960 | LG3211_1236 | Ferritin-like domain protein; Belongs to the Dps family. | Ribosomal subunit interface protein. | 0.536 |
ALN92897.1 | sodB | LG3211_3960 | LG3211_3596 | Ferritin-like domain protein; Belongs to the Dps family. | sodB; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.465 |
ALN92897.1 | wrbA | LG3211_3960 | LG3211_1116 | Ferritin-like domain protein; Belongs to the Dps family. | Quinone oxidoreductase, type IV. | 0.525 |
ALN92897.1 | wrbA-2 | LG3211_3960 | LG3211_3808 | Ferritin-like domain protein; Belongs to the Dps family. | Quinone oxidoreductase, type IV; Belongs to the WrbA family. | 0.525 |
ahpC | ALN92897.1 | LG3211_3871 | LG3211_3960 | Alkyl hydroperoxide reductase subunit C. | Ferritin-like domain protein; Belongs to the Dps family. | 0.699 |
ahpC | sodB | LG3211_3871 | LG3211_3596 | Alkyl hydroperoxide reductase subunit C. | sodB; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.609 |
clpS | ALN92897.1 | LG3211_2358 | LG3211_3960 | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Ferritin-like domain protein; Belongs to the Dps family. | 0.824 |
hrpA | ALN92897.1 | LG3211_3959 | LG3211_3960 | ATP-dependent helicase HrpA. | Ferritin-like domain protein; Belongs to the Dps family. | 0.611 |
raiA | ALN92897.1 | LG3211_1236 | LG3211_3960 | Ribosomal subunit interface protein. | Ferritin-like domain protein; Belongs to the Dps family. | 0.536 |
sodB | ALN92897.1 | LG3211_3596 | LG3211_3960 | sodB; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Ferritin-like domain protein; Belongs to the Dps family. | 0.465 |
sodB | ahpC | LG3211_3596 | LG3211_3871 | sodB; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Alkyl hydroperoxide reductase subunit C. | 0.609 |
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