STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN92897.1Ferritin-like domain protein; Belongs to the Dps family. (189 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.824
ahpC
Alkyl hydroperoxide reductase subunit C.
  
  
 0.699
hrpA
ATP-dependent helicase HrpA.
       0.611
raiA
Ribosomal subunit interface protein.
   
    0.536
ALN91116.1
Sigma 54 modulation / S30EA ribosomal family protein.
   
    0.536
wrbA
Quinone oxidoreductase, type IV.
  
  
 0.525
wrbA-2
Quinone oxidoreductase, type IV; Belongs to the WrbA family.
  
  
 0.525
ALN90304.1
Peroxiredoxin, OsmC subfamily protein.
  
  
 0.484
ALN89577.1
NADPH-dependent FMN reductase family protein.
  
  
 0.477
sodB
sodB; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.465
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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