STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN93211.1Amidinotransferase family protein. (311 aa)    
Predicted Functional Partners:
dusA
Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.
       0.738
ALN90284.1
Hypothetical protein.
  
     0.598
ALN89756.1
Interferon-induced transmembrane family protein.
  
     0.556
ALN90374.1
snoaL-like domain protein.
  
     0.513
ALN91816.1
3HB-oligomer hydrolase family protein.
  
     0.509
ALN92062.1
Histone H1-like nucleoHC2 family protein.
  
    0.509
ALN93205.1
EDD, DegV family domain protein.
  
     0.499
ALN93210.1
Hypothetical protein.
       0.495
ALN89750.1
Membrane protein.
  
     0.479
ALN93050.1
Glycosyltransferase like 2 family protein.
  
     0.478
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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