STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN93541.1Hypothetical protein. (202 aa)    
Predicted Functional Partners:
ALN93542.1
Bacterial regulatory, gntR family protein.
       0.758
ALN89385.1
Peptidase MA superfamily protein.
  
     0.741
ALN89880.1
F5/8 type C domain protein.
  
     0.680
ALN91434.1
F5/8 type C domain protein.
  
     0.656
ALN89764.1
Hypothetical protein.
  
     0.650
phoA
Alkaline phosphatase.
  
     0.631
ALN93235.1
Hypothetical protein.
  
     0.626
ALN91934.1
Saccharopine dehydrogenase family protein.
  
     0.623
ALN89773.1
Receptor ligand binding region family protein.
  
     0.616
ALN93484.1
Alpha/beta hydrolase family protein.
  
     0.616
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.