STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN93575.1Heparinase II/III-like family protein. (548 aa)    
Predicted Functional Partners:
ALN93576.1
Glycosyl transferases group 1 family protein.
 
     0.947
ALN93574.1
Oxidoreductase, NAD-binding Rossmann fold family protein.
 
     0.929
ALN93577.1
Hypothetical protein.
       0.773
ALN93569.1
matE family protein.
 
     0.702
ALN93567.1
[M] COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
     0.698
ALN93568.1
Nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
     0.625
ALN93573.1
Hypothetical protein.
 
     0.624
ALN93571.1
Bacterial transferase hexapeptide family protein.
       0.502
ALN93570.1
Bacterial transferase hexapeptide family protein.
       0.477
ALN93572.1
Hypothetical protein.
       0.465
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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