STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN93680.13-oxoacyl-acyl carrier protein reductase; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (257 aa)    
Predicted Functional Partners:
ALN93681.1
Bacterial regulatory helix-turn-helix, lysR family protein; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.721
dltA-3
D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.685
dltA-6
D-alanine--poly(phosphoribitol) ligase, subunit 1; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.685
ALN89280.1
Short chain dehydrogenase family protein.
  
     0.526
ALN93503.1
3-oxoacyl-[acyl-carrier-protein]reductase.
  
     0.522
ALN91438.1
Hypothetical protein.
  
   0.452
dltA-2
D-alanine--poly(phosphoribitol) ligase, subunit 1.
  
 
 0.436
dltA-7
D-alanine--poly(phosphoribitol) ligase, subunit 1.
  
 
 0.436
phbB-2
acetoacetyl-CoA reductase family protein.
  
     0.434
ALN93987.1
Short chain dehydrogenase family protein.
 
     0.434
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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