STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN93737.1Hypothetical protein. (41 aa)    
Predicted Functional Partners:
mopR
mopR domain protein.
       0.417
ALN93732.1
Phage tail sheath family protein.
       0.413
ALN93733.1
[R] COG3497 Phage tail sheath protein FI.
       0.413
ALN93734.1
Hypothetical protein.
       0.413
ALN93735.1
Hypothetical protein.
       0.413
ALN93736.1
Hypothetical protein.
       0.413
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.