STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN93740.1Glycoside hydrolase 97 family protein. (647 aa)    
Predicted Functional Partners:
ALN90814.1
Hypothetical protein.
 
  
 0.955
agaA-2
Alpha-galactosidase A.
  
  
 0.954
agaA
Alpha-galactosidase A.
 
  
  0.950
exoP-2
Exo-1,3/1,4-beta-glucanase.
  
  
 0.945
exoP-3
Exo-1,3/1,4-beta-glucanase; [G] COG1472 Beta-glucosidase-related glycosidases.
  
  
 0.944
exoP
Exo-1,3/1,4-beta-glucanase; [G] COG1472 Beta-glucosidase-related glycosidases.
  
  
 0.943
ALN89511.1
Alpha amylase, catalytic domain protein; [G] COG0366 Glycosidases.
    
 0.916
ALN89288.1
Melibiase family protein.
     
 0.901
frk1
Fructokinase-1.
    
  0.901
ALN91734.1
Beta-galactosidase.
     
  0.900
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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