STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN93992.1Bacterial lipid A biosynthesis acyltransferase family protein. (324 aa)    
Predicted Functional Partners:
ALN93990.1
MMPL family protein; [R] COG4258 Predicted exporter.
 
     0.968
ALN93989.1
Putative 3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.965
ALN93991.1
Putative fatty acyl-CoA synthetase.
 
   
 0.959
ALN93993.1
fabA-like domain protein.
 
   
 0.948
ALN93995.1
Phosphopantetheine attachment site family protein.
 
   
 0.891
ALN93996.1
FAD binding domain protein.
 
     0.830
ALN93987.1
Short chain dehydrogenase family protein.
 
     0.824
ALN93994.1
Hypothetical protein.
 
     0.805
ALN93983.1
Beta-ketoacyl synthase, N-terminal domain protein.
 
     0.777
ALN94039.1
AMP-binding enzyme family protein.
 
     0.777
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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