Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN90926.1 | ALN92360.1 | LG3211_1957 | LG3211_3414 | Dehydroquinase class II family protein. | Hypothetical protein. | 0.905 |
ALN90926.1 | ALN92451.1 | LG3211_1957 | LG3211_3505 | Dehydroquinase class II family protein. | Hypothetical protein. | 0.900 |
ALN90926.1 | ALN93684.1 | LG3211_1957 | LG3211_4750 | Dehydroquinase class II family protein. | Salicylate synthase. | 0.808 |
ALN90926.1 | aroB | LG3211_1957 | LG3211_1180 | Dehydroquinase class II family protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.942 |
ALN90926.1 | aroE | LG3211_1957 | LG3211_5083 | Dehydroquinase class II family protein. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.933 |
ALN90926.1 | aroQ | LG3211_1957 | LG3211_0818 | Dehydroquinase class II family protein. | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.929 |
ALN90926.1 | quiA | LG3211_1957 | LG3211_4849 | Dehydroquinase class II family protein. | Quinate/shikimate dehydrogenase {Pyrroloquinoline-quinone}; [G] COG4993 Glucose dehydrogenase. | 0.900 |
ALN92360.1 | ALN90926.1 | LG3211_3414 | LG3211_1957 | Hypothetical protein. | Dehydroquinase class II family protein. | 0.905 |
ALN92360.1 | ALN92451.1 | LG3211_3414 | LG3211_3505 | Hypothetical protein. | Hypothetical protein. | 0.900 |
ALN92360.1 | ALN93684.1 | LG3211_3414 | LG3211_4750 | Hypothetical protein. | Salicylate synthase. | 0.800 |
ALN92360.1 | aroB | LG3211_3414 | LG3211_1180 | Hypothetical protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.900 |
ALN92360.1 | aroE | LG3211_3414 | LG3211_5083 | Hypothetical protein. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.900 |
ALN92360.1 | aroQ | LG3211_3414 | LG3211_0818 | Hypothetical protein. | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.900 |
ALN92360.1 | quiA | LG3211_3414 | LG3211_4849 | Hypothetical protein. | Quinate/shikimate dehydrogenase {Pyrroloquinoline-quinone}; [G] COG4993 Glucose dehydrogenase. | 0.900 |
ALN92451.1 | ALN90926.1 | LG3211_3505 | LG3211_1957 | Hypothetical protein. | Dehydroquinase class II family protein. | 0.900 |
ALN92451.1 | ALN92360.1 | LG3211_3505 | LG3211_3414 | Hypothetical protein. | Hypothetical protein. | 0.900 |
ALN92451.1 | ALN93684.1 | LG3211_3505 | LG3211_4750 | Hypothetical protein. | Salicylate synthase. | 0.808 |
ALN92451.1 | aroB | LG3211_3505 | LG3211_1180 | Hypothetical protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.919 |
ALN92451.1 | aroE | LG3211_3505 | LG3211_5083 | Hypothetical protein. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.919 |
ALN92451.1 | aroQ | LG3211_3505 | LG3211_0818 | Hypothetical protein. | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.900 |
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