STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN94026.1Putative transmembrane protein. (549 aa)    
Predicted Functional Partners:
ALN94025.1
Hypothetical protein.
 
    0.968
ALN94027.1
Hypothetical protein.
 
    0.963
ALN94023.1
Hypothetical protein.
 
    0.962
ALN94028.1
RDD family protein.
 
    0.961
ALN94029.1
RDD family protein.
 
    0.880
moxR2
Magnesium chelatase, putative.
 
    0.840
ALN94030.1
Bacterial transferase hexapeptide family protein; '[R] COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily'.
       0.638
ALN92348.1
fecR family protein.
  
     0.621
ALN89062.1
Hypothetical protein.
  
     0.600
ALN90999.1
dnaJ domain protein.
  
     0.600
Your Current Organism:
Lysobacter gummosus
NCBI taxonomy Id: 262324
Other names: ATCC 29489, DSM 6980, KCTC 12132, L. gummosus, LMG 8763, LMG:8763, Lysobacter sp. OeWu101, UASM 402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.