Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN91639.1 | ALN94060.1 | LG3211_2672 | LG3211_5127 | GIY-YIG catalytic domain protein. | Hypothetical protein. | 0.596 |
ALN93252.1 | ALN94060.1 | LG3211_4318 | LG3211_5127 | Hypothetical protein. | Hypothetical protein. | 0.455 |
ALN94059.1 | ALN94060.1 | LG3211_5126 | LG3211_5127 | Bacterial regulatory, luxR family protein. | Hypothetical protein. | 0.538 |
ALN94060.1 | ALN91639.1 | LG3211_5127 | LG3211_2672 | Hypothetical protein. | GIY-YIG catalytic domain protein. | 0.596 |
ALN94060.1 | ALN93252.1 | LG3211_5127 | LG3211_4318 | Hypothetical protein. | Hypothetical protein. | 0.455 |
ALN94060.1 | ALN94059.1 | LG3211_5127 | LG3211_5126 | Hypothetical protein. | Bacterial regulatory, luxR family protein. | 0.538 |
ALN94060.1 | ALN94149.1 | LG3211_5127 | LG3211_5216 | Hypothetical protein. | FMN-dependent dehydrogenase family protein. | 0.629 |
ALN94060.1 | miaA | LG3211_5127 | LG3211_1534 | Hypothetical protein. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.622 |
ALN94149.1 | ALN94060.1 | LG3211_5216 | LG3211_5127 | FMN-dependent dehydrogenase family protein. | Hypothetical protein. | 0.629 |
ALN94149.1 | miaA | LG3211_5216 | LG3211_1534 | FMN-dependent dehydrogenase family protein. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.424 |
miaA | ALN94060.1 | LG3211_1534 | LG3211_5127 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Hypothetical protein. | 0.622 |
miaA | ALN94149.1 | LG3211_1534 | LG3211_5216 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | FMN-dependent dehydrogenase family protein. | 0.424 |