STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Exig_0187PFAM: acyltransferase 3; KEGG: bpu:BPUM_1246 possible acetyltransferase. (352 aa)    
Predicted Functional Partners:
Exig_0188
PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: lpl:lp_1819 teichoic acid biosynthesis protein.
 
     0.867
Exig_2429
PFAM: ComK family protein; KEGG: oih:OB1177 competence transcription factor.
  
     0.604
Exig_0191
PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: lwe:lwe1060 glycosyl transferase, group 2 family protein.
 
     0.588
tarJ
Alcohol dehydrogenase GroES domain protein; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate; Belongs to the zinc-containing alcohol dehydrogenase family.
 
     0.464
Exig_2557
PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: sha:SH0239 hypothetical protein.
 
     0.445
Exig_0186
PFAM: major facilitator superfamily MFS_1; KEGG: bha:BH1775 multidrug-efflux transporter.
       0.442
Exig_2441
KEGG: gtn:GTNG_3055 flagellar protein.
  
     0.430
Exig_0594
PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: bsu:BSU35760 polyglycerol phosphate assembly and export (possibly involved in teichoic acid linkage unit synthesis) (teichoic acid biosynthesis).
 
     0.426
Exig_2993
KEGG: lin:lin0148 hypothetical protein.
 
    0.404
Your Current Organism:
Exiguobacterium sibiricum
NCBI taxonomy Id: 262543
Other names: E. sibiricum 255-15, Exiguobacterium sibiricum 255-15, Exiguobacterium sibiricum str. 255-15, Exiguobacterium sibiricum strain 255-15, Exiguobacterium sp. 255-15, Exiguobacterium strain 255-15
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.