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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Exig_1069PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bld:BLi04099 YwjA. (570 aa)    
Predicted Functional Partners:
Exig_1068
PFAM: NLP/P60 protein; protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: bcy:Bcer98_3768 NLP/P60 protein.
  
    0.508
Exig_1070
Hypothetical protein.
       0.503
Exig_1146
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bha:BH2289 stage V sporulation protein K.
   
 0.440
Exig_1154
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: btl:BALH_1731 multidrug resistance ABC transporter, ATP-binding and permease component.
 
 
0.439
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.419
Your Current Organism:
Exiguobacterium sibiricum
NCBI taxonomy Id: 262543
Other names: E. sibiricum 255-15, Exiguobacterium sibiricum 255-15, Exiguobacterium sibiricum str. 255-15, Exiguobacterium sibiricum strain 255-15, Exiguobacterium sp. 255-15, Exiguobacterium strain 255-15
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