STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Exig_1237KEGG: bld:BLi01287 hypothetical protein. (148 aa)    
Predicted Functional Partners:
Exig_1236
PFAM: protein of unknown function UPF0157; KEGG: bsu:BSU23670 hypothetical protein.
       0.789
Exig_1238
Hydrolase or acyltransferase (alpha/beta hydrolase superfamily)-like protein; KEGG: sus:Acid_5294 alpha/beta hydrolase fold.
       0.751
Exig_1235
PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bcz:BCZK3878 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein.
       0.540
Exig_1239
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bha:BH1790 hypothetical protein.
       0.459
Your Current Organism:
Exiguobacterium sibiricum
NCBI taxonomy Id: 262543
Other names: E. sibiricum 255-15, Exiguobacterium sibiricum 255-15, Exiguobacterium sibiricum str. 255-15, Exiguobacterium sibiricum strain 255-15, Exiguobacterium sp. 255-15, Exiguobacterium strain 255-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.